Trainer’s Registry

You can request to be added to the registry by completing a biography or using this form.

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Name	Institution	Country	Training topics	Training frequency	Contact info	Communities/Funders	Training tags	Links
Jason Williams	Cold Spring Harbor Laboratory	USA	Bioinformatics, Molecular Biology	A few times a year	williams@cshl.edu, twitter: @JasonWilliamsNY	The Carpentries – Software, Data, Library Carpentry, CyVerse, NIH Data Commons	Molecular cloning, R, Python, Jupyter, Docker, cloud computing, RNA-Seq, education and assessment	http://jasonjwilliamsny.github.io/profile/
Ben Langmead	Johns Hopkins University	USA	Bioinformatics, DNA Sequencing, Genomics	Once a year or less	ben.langmead@gmail.com	ISCB – International Society for Computational Biology, NIH – National Institutes of Health, NSF – National Science Foundation	algorithms, data structures, programming	http://www.langmead-lab.org/teaching-materials
Amina Echchiki	Swiss Institute of Bioinformatics / University of Lausanne	Switzerland	Bioinformatics, DNA Sequencing, General Life Sciences, Genomics	A few times a year	a.echchiki@gmail.com; twitter: @aechchik	ELIXIR, SIB Training	bioinformatics, genome assembly, long reads sequencing
Vicky Schneider	Amazon and University of Melbourne	United Kingdom	Bioinformatics, Ecology, General Life Sciences, Scientific writing, Evolutionary biologist	A few times a year	Mvschneiderg@gmail.com	Galaxy	Bioinformatics, population genetics, ecology and evolution of biodiversity, introduction to ML
Nick Wong	Monash university	Australia	Bioinformatics, Genomics	A few times a year	Nick.wong@monash.edu	ABACBS – Australian Bioinformatics and Computational Biology Society	R, genomics, RNA-Seq	https://github.com/MonashBioinformaticsPlatform
Ming Tang	Harvard	USA	Bioinformatics, DNA Sequencing, Genomics	A few times a year	tangming2005@gmail.com	NIH – National Institutes of Health	ChIP-Seq, single cell RNA-Seq, unix shell, R, snakemake	https://divingintogeneticsandgenomics.rbind.io/
Ben Harris	Cold Spring Harbor Laboratory	USA	Bioinformatics	Once a year or less	bharris@cshl.edu @b_harris_12		python
Alex Whan	CSIRO	Australia	Bioinformatics, Genomics	A few times a year	@alexwhan	ABACBS – Australian Bioinformatics and Computational Biology Society, The Carpentries – Software, Data, Library Carpentry	R, git
Noah Fahlgren	Donald Danforth Plant Science Center	USA	Bioinformatics, Genomics, Plant biology, Phenotyping	A few times a year	nfahlgren@danforthcenter.org, Twitter: @NoahFahlgren	ASPB – American Society of Plant Biology, ISCB – International Society for Computational Biology, NSF – National Science Foundation	image analysis, statistics, bioinformatics	https://www.danforthcenter.org/scientists-research/principal-investigators/noah-fahlgren
Peter van Heusden	South African National Bioinformatics Institute, University of the Western Cape	South Africa	Bioinformatics	A few times a year	pvanheus	Galaxy, ASBCB – African Society for Bioinformatics and Computational Biology	python, microbial bioinformatics, galaxy
Radhika Khetani	Harvard University	USA	Bioinformatics, DNA Sequencing, Genomics	Once a month or more	khetani.r@gmail.com, rs_khetani	The Carpentries – Software, Data, Library Carpentry, Galaxy, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training, H3ABioNet – Pan African Bioinformatics network	R, HPC, NGS, Data management	https://hbctraining.github.io/main
Fotis E. Psomopoulos	Institute of Applied Biosciences (INAB/CERTH)	Greece	Bioinformatics, Biology mathematics/statistics	A few times a year	@fopsom	The Carpentries – Software, Data, Library Carpentry, ELIXIR, ISCB – International Society for Computational Biology	NGS Data Analysis, R (Intro / Advanced), Machine Learning for Life Sciences, Reproducibility approaches (Docker, CWL)	https://fpsom.github.io
Sandra Porter	Austin Community College, Shoreline Community College, Digital World Biology LLC	USA	Biochemistry, Bioinformatics, Genomics, Microbiology, I have also taught Genetics, Immunology, and lots of biotech lab courses – cloning, sequencing, tissue culture, immunochemistry, protein purification, media and solution prep, GMPs	A few times a year	digitalbio@gmail.com @digitalbio	ASM – American Soceity for Microbiology, NSF – National Science Foundation, Bio-Link, NABT (National Association of Biology Teachers)	Bioinformatics for biologists, and Bioinformatics for biology instructors	https://DWBio.com
Mauricio Barrientos	Karolinska Institutet	Sweden	Bioinformatics, Genomics	Once a year or less	mauricio.barrientos@ki.se
Sonika Tyagi	Monash University	Australia	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, General Life Sciences, Genomics, Health/medical sciences, Microbiology	A few times a year, Once a month or more	sonika.tyagi@monash.edu, @tsonika	ABACBS – Australian Bioinformatics and Computational Biology Society, The Carpentries – Software, Data, Library Carpentry, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), Galaxy, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training	NGS, RADseq, alignment, de novo assembly, RNAseq, CHIPseq, metagenomics, cancer genomics. R, Python, HPC, open refine	http://github.com/tsonika
Peter Hoyt	Oklahoma State University	USA	Bioinformatics, DNA Sequencing, Genomics, Molecular biology	A few times a year	peter.r.hoyt@okstate.edu @peterrhoyt	The Carpentries – Software, Data, Library Carpentry, CyVerse	Bioinformatics, Genomics, Sequencing
Alyssa Valcourt	James Madison University	USA	Science Librarian who supports Chemistry, Biology, Physics, Geology	A few times a year	valcouah@jmu.edu @alyssavalcourt	ACRL- Association of College & Research Libraries
Conor Meehan	Institute of Tropical Medicine	Belgium	Bioinformatics, DNA Sequencing, Genomics, Health/medical sciences	A few times a year	con_meehan		phylogenetics, molecular epidemiology, pathogen dynamics
Julie McMurry	OSU	USA	Health/medical sciences, GSuite for team science	A few times a year	@figgyjam	NIH – National Institutes of Health	gsuite, data science	https://data2health.github.io/mtip-tutorial/
Emily Lescak	University of Alaska	USA	Bioinformatics, General Life Sciences, Microbiology, Microscopy, Scientific writing, science communication	A few times a year	elescak@alaska.edu; @elescak	Genetics Society of America	science communication, bioinformatics
Olabode Ajayi	University of the Western Cape/SANBI	South Africa	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Genomics, Proteomics	Once a year or less	3004115@myuwc.ac.za	The Carpentries – Software, Data, Library Carpentry, Galaxy, H3ABioNet – Pan African Bioinformatics network, ISCB – International Society for Computational Biology, NIH – National Institutes of Health	Bioinformatics and Datascience	https://github.com/boratonAJ
Lex Nederbragt	University of Oslo	Norway	Bioinformatics	A few times a year	lex.nederbragt@ibv.uio.no Twitter: @lexnederbragt	The Carpentries – Software and Data Carpentry	Bioinformatics, Good Practice in Computational Biology, Reproducibility in Computational Biology, Sequencing data analysis	https://github.com/lexnederbragt
Lisa Federer	National Library of Medicicne	USA	Scientific writing, data management and visualization, R programming	Once a year or less	lisa.federer@nih.gov	NIH – National Institutes of Health	R, data management, data visualization, text mining	https://github.com/informationista/
Lee Katz	Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention	USA	Bioinformatics	Once a year or less	@lskatz		genomic epidemiology, comparative genomics
Adrian Gomez	Cold Spring Harbor Laboratory	USA	General Life Sciences, Neuroscience, Neurobiologist turned Science Informationist	A few times a year	@cheech_gomez	NIH – National Institutes of Health, NSF – National Science Foundation, SFN – Society for Neuroscience
Srihari Radhakrishnan	Arc Bio	USA	Bioinformatics, Genomics	Once a year or less	srihari176@gmail.com		sequencing, dataviz, bioinformatics, unix, R	https://www.linkedin.com/in/srihari-radhakrishnan-6777528/
Karen Word	UC Davis / the Carpentries	USA	Bioinformatics, Ecology, Genomics, Instructor training	A few times a year	krlizars@ucdavis.edu, @karen_word	The Carpentries – Software, Data, Library Carpentry, NIH – National Institutes of Health
Robert Davey	Earlham Institute	United Kingdom	Bioinformatics, Scientific writing, Scientific Computing, Soft skills, e.g. poster design	A few times a year	@froggleston	The Carpentries – Software, Data, Library Carpentry, CyVerse, ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), Galaxy, NSF – National Science Foundation	Data management, Information Systems, HPC, ontologies	https://github.com/froggleston
Toby Hodges	EMBL	Germany	Bioinformatics	Once a month or more	@tbyhdgs	ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Python, Bash, Version Control, Data Management, Regular Expressions, HPC	https://bio-it.embl.de
Umar Ahmad	Universiti Putra Malaysia and Malaysia Genome Institute (MGI)	Malaysia	Bioinformatics, DNA Sequencing, Genomics, Neuroscience, Scientific writing	Once a year or less	babasaraki@yahoo.co.uk/@babasaraki01	H3ABioNet – Pan African Bioinformatics network, ISCB – International Society for Computational Biology, ASBCB – African Society for Bioinformatics and Computational Biology	Bioinformatics, R, RNA-seq analysis, Python and Cancer Genomics
Terri Attwood	The University of Manchester	United Kingdom	Bioinformatics	A few times a year	teresa.k.attwood@manchester.ac.uk	GOBLET – Global Organisation for Bioinformatics Learning, Education & Training	protein sequence analysis, protein family characterisation, protein function annotation, introductory bioinformatics 4 schools	https://www.research.manchester.ac.uk/portal/en/researchers/terri-attwood(7df29450-9ecd-4f4d-9e77-32f25f255d97)/publications.html
Edgar	Mount Sinai	USA	Biochemistry, Bioinformatics, Biology mathematics/statistics, Cell biology, DNA Sequencing, Ecology, General Life Sciences, Genomics, Marine biology, Metabolomics, Microbiology, Molecular biology, Proteomics, Scientific writing	A few times a year	eegonzalezk@gmail.com		Bioinformatics, Immunology, Biology	https://eegk.github.io/
Samuel Seaver	Argonne National Laboratory	USA	Biochemistry, Bioinformatics, Biology mathematics/statistics, Plant biology	Once a year or less	@samseaver	ASPB – American Society of Plant Biology
Molly Phillips	University of Florida	USA	Bioinformatics, Ecology, Marine biology, Plant biology	Once a month or more	mphillips@flmnh.ufl.edu	iDigBio	biodiversity, digitization data, natural history collections, biology, K-12, undergraduate, ecology	https://www.idigbio.org/
Clint Valentine	TwinStrand Biosciences	USA	Bioinformatics, DNA Sequencing, Genomics	Once a year or less	valentine.clint@gmail.com	EMGS – Environmental Mutagenesis & Genomics Society	Python, DNA Sequencing, Reproducible Bioinformatics Analysis	https://github.com/clintval
Sateesh Peri	University of Nevada, Reno	USA	Bioinformatics, Cell biology, Molecular biology	A few times a year	perisateesh@nevada.unr.edu	The Carpentries – Software, Data, Library Carpentry, CyVerse
Ahmed Moustafa	American University in Cairo	Egypt	Bioinformatics, Biology mathematics/statistics, Genomics	A few times a year	amoustafa@aucegypt.edu	ASM – American Soceity for Microbiology, The Carpentries – Software, Data, Library Carpentry, ISCB – International Society for Computational Biology	Bioinformatics, Systems Biology, Population Genetics, Evolution
Denise Carvalho-Silva	EMBL-EBI (Open Targets)	United Kingdom	Bioinformatics, Genomics, Health/medical sciences, Drug discovery	Once a month or more	@deniseome	EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Ensembl genome browser, Open Targets, Genetic variation, Gene annotation	https://github.com/deniseome
Tyson Swetnam	University of Arizona	USA	Ecology, Remote Sensing	A few times a year	tswetnam@cyverse.org	The Carpentries – Software, Data, Library Carpentry, CyVerse, NEON – National Ecological Observatory Network, NSF – National Science Foundation	R, Python, Remote Sensing, GIS, Ecology, Statistics, lidar, structure from motion	https://tyson-swetnam.github.io/
Moamen Elmassry	Texas Tech University	USA	Bioinformatics, Microbiology	A few times a year	moamen.elmassry@gmail.com; @MoamenElmassry	ASM – American Soceity for Microbiology	R, Unix, RNA-seq, microbiome, visualization	https://github.com/MoamenElmassry
Marcia Mednick	Takara Bio USA	USA	Cell biology, DNA Sequencing, General Life Sciences, Microbiology, Molecular biology	Once a month or more	marciamednick@gmail.com
Marco Chiapello	Italian National Research Council	Italy	Bioinformatics, DNA Sequencing, Genomics, Plant biology, Proteomics	A few times a year	chiapello.m@gmail.com / marpello1980	The Carpentries – Software, Data, Library Carpentry, ELIXIR	R, data analysis, proteomics analysis
Naupaka Zimmerman	University of San Francisco	USA	Bioinformatics, Biology mathematics/statistics, Ecology, Genomics	A few times a year	@naupakaz	ASM – American Soceity for Microbiology, The Carpentries – Software, Data, Library Carpentry, ESA – Ecological society of america, NEON – National Ecological Observatory Network, NSF – National Science Foundation	microbial ecology, community ecology, reproducible research	http://z-lab.io/
Jeff Oliver	University of Arizona	USA	Bioinformatics, Ecology, Evolution	Once a month or more	jcoliver@email.arizona.edu, @jcoliverAZ	The Carpentries – Software, Data, Library Carpentry, CyVerse	R, python, phyloinformatics	https://jcoliver.github.io/learn-r
Sarah Stevens	University of Wisconsin – Madison	USA	Bioinformatics, Ecology, Genomics	A few times a year	@microStevens	The Carpentries – Software, Data, Library Carpentry		http://sarahlrstevens.info
Chissa Rivaldi	University of Notre Dame	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Ecology, General Life Sciences, Population genetics	A few times a year	clrivaldi@gmail.com, @powerofcheez	The Carpentries – Software, Data, Library Carpentry	bash, python; r, anatomy, physiology, population genetics, GIS	https://github.com/crivaldi
Chris Fields	University of Illinois Urbana-Champgin	USA	Bioinformatics, DNA Sequencing, Microbiome/Metagenome, Genomics	several times a year (varies)	@cjfields	The Carpentries – Software, Data Carpentry; BD2K; H3ABioNet – Pan African Bioinformatics network	HPC, Python, R, Perl, Genomics, Epigenome, Metagenome, Microbiome	https://github.com/HPCBio
Alexander Botzki	VIB	Belgium	Bioinformatics, Cheminformatics, General Life Sciences	A few times a year	alexander.botzki@vib.be, @vibbioinfocore	ELIXIR	bash, python, docker, bioconda, protein structure analysis	https://www.bits.vib.be
Bérénice Batut	University of Freiburg	Germany	Bioinformatics, Genomics	A few times a year	berenice.batut@gmail.com @bebatut	The Carpentries – Software, Data, Library Carpentry, ELIXIR, Galaxy, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training	http://research.bebatut.fr/
Sean Davis	National Cancer Institute, NIH	USA	Bioinformatics, Biology mathematics/statistics, Genomics, Health/medical sciences	A few times a year		NIH – National Institutes of Health, Cold Spring Harbor Laboratory	Bioinformatics, Data Science, Cloud and Distributed Computing, Reproducible Research, Science IT, R	https://seandavi.github.io/
James Taylor	Johns Hopkins	USA	Bioinformatics, DNA Sequencing, General Life Sciences, Genomics, Molecular biology	A few times a year	@jxtx	Galaxy, ISCB – International Society for Computational Biology, NIH – National Institutes of Health, NSF – National Science Foundation	https://taylorlab.org
Ann Meyer	bioinformatics.ca	Canada	Bioinformatics	A few times a year	course_info@bioinformatics.ca	GOBLET – Global Organisation for Bioinformatics Learning, Education & Training	https://bioinformaticsdotca.github.io/
Henk den Bakker	University of Georgia	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Genomics, Microbiology	A few times a year	henkcdenbakker@gmail.com	ASM – American Society for Microbiology	https://github.com/hcdenbakker
Mark Dunning	University of Sheffield	United Kingdom	Bioinformatics, Genomics, Software and Data Carpentry	A few times a year	m.j.dunning@sheffield.ac.uk, twitter:@DrMarkDunning	The carpentries-Software,Data	bioinformatics,R,genomics,RNA-seq	Sheffield Bioinformatics Core
Piraveen Piv Gopalasingam	European Bioinformatics Institute (EMBL-EBI)	United Kingdom	Bioinformatics	Once a month or more	piv@ebi.ac.uk , @cascade21	ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), Galaxy, ISCB – International Society for Computational Biology
Niall Beard	University of Manchester	United Kingdom	Bioinformatics	Once a year or less	niall.beard@manchester.ac.uk / @niall_beard	The Carpentries – Software, Data, Library Carpentry, ELIXIR, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training
Peter Rice	Oryza Bioinformatics	United Kingdom	Bioinformatics, Biology mathematics/statistics, General Life Sciences, Genomics, Health/medical sciences, Molecular biology	A few times a year	ricepeterm@yahoo.co.uk	i2b2-tranSMART Foundation
Ted Laderas	Oregon Health & Science University	USA	Bioinformatics, Biology mathematics/statistics, Health/medical sciences	A few times a year	@tladeras
Jonathan Cummings	School for Marine Science and Technology	USA	Biology mathematics/statistics, Ecology, Structured Decision Making	A few times a year	jonathan.cummings@gmail.com	Society of Conservation Biology
Kate Hertweck	Fred Hutch Cancer Research Center	USA	Bioinformatics, Biology mathematics/statistics, Genomics	Once a month or more	@k8hert, k8hertweck@gmail.com	The Carpentries – Software, Data, Library Carpentry
Jarrett Byrnes	University of Massachusetts Boston	USA	Ecology, Marine biology	A few times a year	jebyrnes	The Carpentries – Software, Data, Library Carpentry, ESA – Ecological society of america, NSF – National Science Foundation
Mateusz Kuzak	Dutch Techcentre fo Life Sciences	the Netherlands	Bioinformatics, Software Engineering, Data Analysis	A few times a year	@matkuzak mateusz.kuzak@dtls.nl	the Carpentries, ELIXIR, RSE	Pedagogy, R, Python, Docker, Jupyter
Chantal Huijbers	Griffith University	Australia	Bioinformatics, Ecology	Once a month or more	c.huijbers@griffith.edu.au	Australian Research Data Commons	biodiversity modelling, data quality, ecological data science, train-the-trainer	http://ecoed.org.au/
Siva Chudalayandi	Iowa State University	USA	Bioinformatics, Plant biology	A few times a year	csiva@iastate.edu	CyVerse, Galaxy, NSF – National Science Foundation, USDA	RNAseq; Genome Assembly	https://isugenomics.github.io/bioinformatics-workbook/
Patricia Palagi	SIB Swiss Institute of Bioinformatics	Switzerland	Bioinformatics, Proteomics, Train the trainer	A few times a year	patricia.palagi@sib.swiss	ELIXIR, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training, ISCB – International Society for Computational Biology	Train-the-trainer, training organisation, training planning and strategy	https://github.com/TrainTheTrainer/ELIXIR-EXCELERATE-TtT
Jacqueline Campbell	Iowa State University	USA	Bioinformatics, DNA Sequencing, Genomics, Data Curation	Once a year or less	jdjax@iastate.edu @Campbell_JD_PhD	AgBioData	Data Curation, Bioinformatics, Genetics/Genomics	https://www.agbiodata.org/
Mike Trizna	Smithsonian Institution	USA	Bioinformatics, DNA Sequencing, Ecology, General Life Sciences, Genomics, Metagenomics, Data Science	Once a month or more	triznam@si.edu; @miketrizna	The Carpentries – Software, Data, Library Carpentry	Genomics, Data Science, Machine Learning	https://github.com/MikeTrizna
Jenny Drnevich	University of Illinois Urbana-Champaign	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Genomics	A few times a year, Once a month or more	drnevich@illinois.edu	The Carpentries – Software, Data, Library Carpentry, H3ABioNet – Pan African Bioinformatics network	R, Linux, Cluster Computing, RNASeq, 16S
Jessica Holmes	University of Illinois at Urbana – Champaign	USA	Bioinformatics, DNA Sequencing, Genomics, Transcriptomics, Metagenomics	Once a month or more	jholmes5@illinois.edu	The Carpentries – Software, Data, Library Carpentry, H3ABioNet – Pan African Bioinformatics network, ISCB – International Society for Computational Biology, BD2K	Bash, R, RNA-Seq, microbial profiling, genome browsers, git, genome assembly
Gabriella Rustici	University of Cambridge	United Kingdom	Bioinformatics, Biology mathematics/statistics, Genomics, Health/medical sciences, Metabolomics, Proteomics, Imaging	Once a month or more	gr231@cam.ac.uk	The Carpentries – Software, Data, Library Carpentry, ELIXIR, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training, ISCB – International Society for Computational Biology, Health Data Research UK	bioinformatics; biology; data science; training development; training infrastructure	https:/training.csx.cam.ac.uk/bioinformatics/Event-timetable
Scott Cain	Ontario Institute for Cancer Research	USA	Bioinformatics, Genomics	A few times a year	scott@scottcain.net	GMOD	JBrowse,Chado,Tripal	http://gmod.org/wiki/User:Scott
Robert Waterhouse	University of Lausanne	Switzerland	Bioinformatics, Genomics	A few times a year	robert.waterhouse@gmail.com @rmwaterhouse		biocuration, gene annotation	https://rmwaterhouse.org/profile
Jeff Pummill	University of Arkansas	USA	Bioinformatics, DNA Sequencing, Genomics, scientific computing resources and best practices	A few times a year	jpummil@uark.edu	The Carpentries – Software, Data, Library Carpentry, NSF – National Science Foundation	nanopore assembly hpc
Joseph Weaver	North Carolina State University	USA	Bioinformatics, DNA Sequencing, Ecology, Genomics, Microbiology, Microscopy, Environmental Biotechnology	A few times a year	jeweave4@ncsu.edu @Joe_E_Weaver	NSF – National Science Foundation, US Department of Education – GAANN	bioinformatics, data visualization, data science	https://github.com/joeweaver/get_to_know_phyloseq
Eduardo Rodríguez-Román	Venezuelan Institute for Scientific Research	Venezuela	Bioinformatics, DNA Sequencing, General Life Sciences, Microbiology, Molecular biology, Virology	A few times a year	erodriguezroman@gmail.com	ASM – American Soceity for Microbiology, Galaxy, eLIFE Community, American Society for Virology	Virology, Molecular Epidemiology, Virus Evolution
Candace Savonen	Alex’s Lemonade Stand Foundation	USA	Bioinformatics	A few times a year	cansav09@gmail.com	ISCB – International Society for Computational Biology	gene expression, single-cell, RNA-seq	https://github.com/alexslemonade
Philipp Bayer	University of Western Australia	Australia	Bioinformatics, Genomics	A few times a year	philipp.bayer@uwa.edu.au @philippbayer	ABACBS – Australian Bioinformatics and Computational Biology Society, The Carpentries – Software, Data, Library Carpentry, EMBL-ABR	bioinformatics,genomics,R/tidyverse,Python,bash,SQL,git
Boas Pucker	Center for Biotechnology (CeBiTec), Bielefeld University	Germany	Bioinformatics, DNA Sequencing, Genomics, Molecular biology, Plant biology, Scientific writing	A few times a year	@boas_pucker	CyVerse, DFG – German Research Foundation	genomics, Python, applied bioinformatics, RNA-Seq analysis, genetic engineering, iGEM, plant biology, sequencing	https://www.cebitec.uni-bielefeld.de/~bpucker
Arindam Basu	University of Canterbury	New Zealand	Genomics, Health/medical sciences, Scientific writing	A few times a year	@arinbasu	The Carpentries – Software, Data, Library Carpentry, CyVerse	data analysis, R, Jupyter notebooks,	https://www.canterbury.ac.nz/education/contact-us/people/arindam-basu.html
Robert Haase	MPI-CBG	Germany	Bioinformatics, Biology mathematics/statistics, Image Analysis	Once a month or more	@haesleinhuepf	NEUBIAS	Image Analysis, Smart Microscopy, Software Engineering, GPU-acceleration	https://github.com/haesleinhuepf
Lilach Sheiner	University of Glasgow	United Kingdom	Biochemistry, Cell biology, Microbiology, Molecular biology, parasitology	Once a year or less	@SheinerLab	ASM – American Soceity for Microbiology, Wellcome trust, Gates foundation, Burrough Wellcome fund	Parasite biology, molecular biology	http://lilachsheiner.wixsite.com/sheinerlab-wtcmp
David Armstrong	PDBe (EMBL-EBI)	United Kingdom	Biochemistry, Bioinformatics, Structural Biology	A few times a year	davida@ebi.ac.uk, @daveasci	ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Structural biology, protein structure, biochemistry, proteins, structure prediction, NMR.	https://www.ebi.ac.uk/about/people/david-armstrong
Walid Gharib	Swiss Institute of Bioinformatics	Switzerland	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Genomics	A few times a year		ELIXIR
Shishir Pant	Helainki University	Finland	Cell biology, Molecular biology, Scientific writing	Once a year or less	shishir.pant64@gmail.com		Cancer biology, scientific writing	https://chasingcancer.com/
Ronnie de Jonge	Utrecht University	The Netherlands	Bioinformatics, DNA Sequencing, Genomics, Microbiology	A few times a year	r.dejonge@uu.nl		Microbial genomics, genome (re)sequencing, genome annotation
Brian Repko	Previously Novartis Institutes for Biomedical Research	USA	Bioinformatics, Cell biology, DNA Sequencing, General Life Sciences, Genomics, Health/medical sciences, Metabolomics, Molecular biology, Proteomics	Once a year or less	brian.repko@gmail.com	GA4GH, BigDataGenomics	drug discovery, basic molecular biology	https://github.com/brianrepko
Nirav Merchant	University of Arizona	USA	Bioinformatics, Cloud/Computational Infrastructure	A few times a year	nirav@email.arizona.edu	The Carpentries – Software, Data, Library Carpentry, CyVerse, ISCB – International Society for Computational Biology, NIH – National Institutes of Health, NEON – National Ecological Observatory Network, NSF – National Science Foundation	cloud scalability data-management	http://www.cyverse.org
Osvaldo Reis Junior	Unicamp	Brazil	Bioinformatics	A few times a year	osvaldor@unicamp.br	LaCTAD – Central Laboratory of High Throughput Technologies in Life Science
Amber Leckenby	University of Bradford	United Kingdom	Biochemistry, Bioinformatics, Cell biology, DNA Sequencing, General Life Sciences, Genomics, Metabolomics, Molecular biology	A few times a year	@amberleckenby	Data carpentry	unix, genome assesmbly, metagenomics, microbiome, R stats
Jeanette McCarthy	Precision Medicine Advisors, Duke University, UCSF	USA	Genomics, Health/medical sciences	A few times a year	jeanette@pmedadvisors.com		precision medicine, pharmacogenomics, genetic testing	https://www.precisionmedicineadvisors.com/
Jasleen Grewal	University of British Columbia	Canada	Bioinformatics, Genomics, Molecular biology	A few times a year		Genome Canada, ISCB – International Society for Computational Biology	genetics;machine-learning;coding	https://jasgrewal.github.io/tutorials/
Joanna Kelley	Washington State University	USA	Bioinformatics, DNA Sequencing, Genomics	Once a year or less	joanna.l.kelley@wsu.edu, @joannalkelley	NSF – National Science Foundation	genomics, transcriptomics, bioinformatics	https://labs.wsu.edu/genomes
Gabriela Chavez	Auburn University, Department of Biological Sciences	USA	Biochemistry, Cell biology, Health/medical sciences, Molecular biology	A few times a year	gabriela.chavez@auburn.edu	ASM – American Soceity for Microbiology	Virology, RNA viruses, emerging viruses, virus evolution	https://github.com/gabrielachavez2019
Laurent Gatto	UCLouvain, de Duve Institute	Belgium	Bioinformatics, Genomics, Proteomics, Reproducible research	A few times a year	@lgatt0	The Carpentries – Software, Data, Library Carpentry	R, git	https://lgatto.github.io/
Lucia Cottone	University College London	United kingdom	Cell biology, Molecular biology	Once a year or less	l.cottone@ucl.ac.uk		Cancer, epigenetic
Alina Freire-Fierro	Universida Tecnica de Cotopaxi	Ecuador	General Life Sciences, Plant biology	Once a year or less	Alina.ff@gmail.com	IAPT-International Society of Plant Taxonomy	General Botany, Neitropical Floristics, Collections Management in Herbaria
Mark Crowe	QCIF	Australia	Bioinformatics, Biology mathematics/statistics, Genomics	A few times a year	mark.crowe@qcif.edu.au @marklcrowe	The Carpentries – Software, Data, Library Carpentry, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), Galaxy	Genomics, Galaxy, R
Adrien Melquiond	University Medical Center Utrecht / Utrecht University / Utrecht Bioinformatics Center	The Netherlands	Bioinformatics, Biology mathematics/statistics, Genomics, Molecular Modelling	A few times a year	https://twitter.com/AMelquiond	The Carpentries – Software, Data, Library Carpentry, ELIXIR, ISCB – International Society for Computational Biology	R, Python, Bioinformatics, Molecular Modelling, Molecular Dynamics, Molecular Docking, Biostatistics	https://www.uu.nl/staff/ASJMelquiond
Peter McQuilton	University of Oxford	United Kingdom	Bioinformatics, General Life Sciences	A few times a year	@drosophilic	ELIXIR, International Society of Biocurators, RDA, GO-FAIR…	Standards, FAIR data, Research Data Management
Dayana E. Salas-Leiva	Dalhousie University	Canada	Bioinformatics, DNA Sequencing, Genomics, Microbiology	Once a year or less
Igor Dolgalev	New York University School of Medicine	USA	Bioinformatics, DNA Sequencing, Genomics	A few times a year	igor.dolgalev@nyumc.org
MD Sharma	University of Exeter	United Kingdom	Bioinformatics, DNA Sequencing, General Life Sciences, Genomics, Metabolomics, Microscopy, Molecular biology	Once a year or less	m.d.sharma@exeter.ac.uk	The Carpentries – Software, Data, Library Carpentry	hpc,Linux, Informatics
Emma Rand	University of York, UK	United Kingdom	Bioinformatics, Biology mathematics/statistics, Metabolomics, Proteomics	A few times a year	emma.rand@york.ac.uk @er13_r	Royal Society of Biology, the Biochemical Society	data analysis, data visualisation, R, Python, reproducibility, Teaching and learning	https://www.york.ac.uk/biology/our-staff/emma-rand/
Pamela Shaw	Northwestern University Feinberg School of Medicine	USA	Bioinformatics, General data management concepts	A few times a year	p-shaw2@northwestern.edu	The Carpentries – Software, Data, Library Carpentry, ISCB – International Society for Computational Biology	genome browsers, command line	https://github.com/galterdatalab
Michelle Jones	Cedars-Sinai Medical Center	US	Bioinformatics, Genomics	Once a year or less	Michelle.jones@csmc.edu		Genetic Epidemiology, Genomics, Genetics
Daniel Blankenberg	Lerner Research Institute, Cleveland Clinic	USA	Bioinformatics, DNA Sequencing, General Life Sciences, Genomics, Molecular biology	A few times a year	@DBlankenberg	Galaxy, ISCB – International Society for Computational Biology, NIH – National Institutes of Health		http://blankenberglab.org/
Lok Raj Joshi	South Dakota State University	USA	DNA Sequencing, Genomics, Microbiology, Molecular biology, Virology		lokraj2003@hotmail.com		R programming, Viral Bioinformatics, Virology, Molecular Biology	http://www.lokspage.netlify.com
Pamela Shaw	Northwestern University Feinberg School of Medicine	USA	Bioinformatics, Scientific writing, NIH Public Access Compliance	Once a month or more	p-shaw2@northwestern.edu	The Carpentries – Software, Data, Library Carpentry, ISCB – International Society for Computational Biology, NIH – National Institutes of Health	genome browsers, bioinformatics (general), basic command line	https://galterdatalab.github.io/
Dipankar Dutta	National Institutes of Health	USA	Biology mathematics/statistics, Neuroscience, Data Science for Life Sciences	Once a month or more	dipankardutta@scientificcitizen.org; @duttajdip	NIH – National Institutes of Health, SFN – Society for Neuroscience	Data Science for Life Sciences	https://scientificcitizen.org
Noushin Ghaffari	Genomics and Bioinformatics, Texas A&M AgriLife Research Research Scientist, Texas A&M High Performance Research Computing	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, General Life Sciences, Genomics, Plant biology	Once a month or more	nghaffari@tamu.edu	The Carpentries – Software, Data, Library Carpentry	Genome assembly, metagenmics, statistical analysis, computational biology	https://www.linkedin.com/in/noushin-ghaffari-a8197133
Nathan Medd	University of Edinburgh	United Kingdom	Bioinformatics, Ecology, Entomology	Once a month or more	nathan.medd@ed.ac.uk	The Carpentries – Software, Data, Library Carpentry, ELIXIR	bioinformatics, R, Linux, Genome Assembely, Metagenomics, RNA-seq, Entomology, Ecology	http://genomics.ed.ac.uk/services/training
Alana Alexander	University of Otago	New Zealand	Bioinformatics, Genomics	A few times a year	alana.alexander@otago.ac.nz, @laninsky	The Carpentries – Software, Data, Library Carpentry	Molecular ecology, R, genomics	https://gemmell-lab.otago.ac.nz/our-team/19-team/research-and-postdoctoral-research-fellows/138-dr-alana-alexander
Jill Wegrzyn	University of Connecticut	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, General Life Sciences, Genomics, Molecular biology, Plant biology, Scientific writing	A few times a year	jill.wegrzyn@uconn.edu @JillWegrzyn	Galaxy, ISCB – International Society for Computational Biology, NEON – National Ecological Observatory Network, NSF – National Science Foundation, USDA	bioinformatics, plant genomics, genome annotation	http://plantcompgenomics.com
Ana Panigassi	Self employed	Ireland	Health/medical sciences, Scientific writing	A few times a year	@ana_panigassi		Clinical mentor, science communication	https://anapanigassi.wixsite.com/anapanigassi
Alexander Pico	Gladstone Institutes	USA	Bioinformatics, Network biology	A few times a year	alex.pico@gladstone.ucsf.edu	ELIXIR, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training, ISCB – International Society for Computational Biology, NIH – National Institutes of Health	network biology, cytoscape	http://tutorials.cytoscape.org
Manuel Corpas	Cambridge Precision Medicine	United Kingdom	Clinical Genomics, Bioinformatics, Next Generation Sequencing, Precision Medicine	A few times a year	@manuelcorpas		Clinical Genomics, Bioinformatics, Next Generation Sequencing, Precision Medicine
Rebecca Batorsky	Tufts University	USA	R, python, HPC, Linux, Bioinformatics	A few times a year	rebecca.batorsky@tufts.edu		R, python, HPC, Linux, Bioinformatics
Geraldine Van der Auwera	Broad Institution	USA	Genomics, Variant discovery analysis, Pipelining, Jupyter notebooks, Cloud computing for scientists	A few times a year	@VdaGeraldine		Genomics, Variant discovery analysis, Pipelining, Jupyter notebooks, Cloud computing for scientists
April Clyburne-Sherin	Code Ocean	USA	Reproducibility (computational and empirical), data management, open data and code, R, literate programming (Jupyter Notebooks and RMarkdown), curriculum development, and instructor training.	A few times a year	@april_cs	OpenCon, Reproducibility 4 Everyone Collaboration, Mozilla Mentors, Carpentries, WholeTale Education Working Group, Reproducibility Ambassador Program, AllTrials	Reproducibility (computational and empirical), data management, open data and code, R, literate programming (Jupyter Notebooks and RMarkdown), curriculum development, and instructor training.
Ana Paula Panigassi	Self employed	Ireland	Clinical Mentoring	A few times a year			Clinical Mentoring	https://anapanigassi.wixsite.com/anapanigassi
Madelaine Gogol	Stowers Institute	United States	Bioinformatics, Genomics	A few times a year	mcm@stowers @mmarchin		R,Linux,RNA-seq,ChIP-seq,scRNA-seq
Ben Moore	EMBL-EBI	United Kingdom	Bioinformatics, Genomics	Once a month or more	bmoore@ebi.ac.uk, twitter: @BENsembl	EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Ensembl, Genome browsers, Gene annotation, Genetic variation, IGSR	https://github.com/Ben-Ensembl
Gareth Price	Queensland Facility of Advanced Bioinformatics	Australia	Bioinformatics, DNA Sequencing, General Life Sciences, Genomics	A few times a year	g.price@qfab.org; @DrGPrice	Galaxy, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training	Bioinformatics, NGS QC, Galaxy, Clinical Genomics	https://qfab.org/team-member/dr-gareth-price
Luis Cunha	University of South Wales	Portugal & United Kingdom	Bioinformatics, DNA Sequencing, Ecology, Genomics, Molecular biology, Soil Biology	Once a year or less	luisnevescunha@gmail.com	ISCB – International Society for Computational Biology, Tpinet.org	Genomics, Functional Genomics, Eukaryotic genomes, Biodiversity, Anthropogenic Ecosystems, Biodiversity assessment, Soil Biology, Tropical Ecology, Historical ecosystem reconstruction, Phylogenetics/omics, Invertebrate Biology	http://luiscunha.xyz
David Gaboriau	Imperial College London	United Kingdom	Biochemistry, Cell biology, Microscopy, BioImage Analysis	A few times a year	@dgaboriau	NEUBIAS, IAFIG-RMS	microscopy, bioimage analysis
Amel Ghouila	H3ABioNet	Tunisia/USA	Bioinformatics, Genomics, Scientific writing	A few times a year	amel.ghouila@gmail.com / @AmelGhouila	H3ABioNet – Pan African Bioinformatics network, ISCB – International Society for Computational Biology, African Society of Bioinformatics and Computational Biology	bioinformatics, open science, community building	https://amelgh.github.io/
Benjamin Moore	Ensembl, EMBL-EBI	United Kingdom	Bioinformatics, Genomics, Ensembl	Once a month or more	bmoore@ebi.ac.uk	ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Ensembl, Genomics, Bioinformatics, Genetic Variation,	https://www.ebi.ac.uk/about/people/benjamin-moore
Caleb Kibet	International Centre of Insect Physiology and Ecology	Kenya	Bioinformatics, Genomics	A few times a year	kipkuruis@hotmail.com Twitter: @calkibet	H3ABioNet – Pan African Bioinformatics network, ISCB – International Society for Computational Biology	Python, Regulatory Genomics, Bioinformatics Workflows, Linux, Open Science Tool: Git and GitHub	https://github.com/kipkurui
Venkat Malladi	UT Southwestern	USA	Bioinformatics, Genomics	A few times a year	venkat.malladi@utsouthwestern		Python, Genomics, Data Science, Software Engineering
Patricia Carvajal Lopez	Bioinformatics Laboratory UABC	México	Bioinformatics	A few times a year		EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), ISCB – International Society for Computational Biology	RNA-Seq, NGS, HMM, Linux
Hans-Rudolf Hotz	Friedrich Miescher Institute for Biomedical Research	Switzerland	Bioinformatics	Once a month or more	hrh@fmi.ch	ELIXIR, Galaxy, GOBLET – Global Organisation for Bioinformatics Learning, Education & Training, ISCB – International Society for Computational Biology, SIB – Swiss Institute of Bioinformatics	Galaxy, NGS	https://training.galaxyproject.org/training-material/
Zimai Li	University of Munich	Germany	Biology mathematics/statistics, Ecology, General Life Sciences, Genomics, Evolutionary Biology	A few times a year	zimai.li@evobio.eu		Behavioral Ecology
Lena Karvovskaya	Vrije Universiteit van Amsterdam	Netherlands	Research data management	A few times a year	e.karvovskaya@vu.nl		metadata, archiving, open data, FAIR principles
Sarah Stryeck	Graz University of Technology, Austria	Austria	Biochemistry, Bioinformatics	A few times a year	sarah.stryeck@tugraz.at	The Carpentries – Software, Data, Library Carpentry, CyVerse	Docker, metabolomics
Nur-Taz Rahman	Yale University School of Medicine	United States	Bioinformatics, Cell biology, DNA Sequencing, General Life Sciences, Genomics, Metabolomics, Molecular biology, Scientific writing	Once a month or more	@NurTaz_Rahman; email: nur-taz.rahman@yale.edu	Bioinformatics Support Program @ Cushing/Whitney Medical Library at Yale	R, RStudio, single-cell analysis, RNA-seq, ChIP-seq, UNIX, Python, Galaxy, GSEA	https://medicine.yale.edu/profile/nur-taz_rahman/
Benjamin Moore	EMBL-EBI (Ensembl)	UK	Bioinformatics, Genomics	Once a month or more	bmoore@ebi.ac.uk, @BENsembl	EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)	Ensembl genome browser, genomics, genetic variation, gene annotation, Ensembl	https://www.ebi.ac.uk/about/people/benjamin-moore
Amanda Charbonneau	UC Davis	USA	Bioinformatics, Biology mathematics/statistics, DNA Sequencing, Genomics	A few times a year	achar@ucdavis.edu	The Carpentries – Software, Data, Library Carpentry, NIH – National Institutes of Health		https://acharbonneau.github.io/
Marta Lloret	EMBL-EBI	UK	Biochemistry, Bioinformatics, Genomics, Molecular biology	A few times a year		ELIXIR, EMBL – European Molecular Biology Laboratory (and all EMBL-related projects)
Jessime Kirk	CodeStories	US	Bioinformatics, Genomics	Once a year or less	codestories2018@gmail.com		Python, Applied Bioinformatics, Sequence Analysis, Numpy, Pandas, Image Analysis, Software Engineering	https://mycodestories.com/
Astrid Gall	EMBL-EBI and Lucy Cavendish College, University of Cambridge, UK	United Kingdom	Bioinformatics, Genomics	Once a month or more		EMBL – European Molecular Biology Laboratory (and all EMBL-related projects), Wellcome Trust	Ensembl, REST API, Train the Trainer, Genomics, Bioinformatics	https://www.ebi.ac.uk/about/people/astrid-gall
Obdulia Segura-Leon	Colegio de Postgraduados	México	Agrogenomic	Once a year or less	sleon@colpos.mx		Homology, alignment, motivs and protein domains, phylogeny, adaptation by sinonimus no sinonimus ratios,

Trainer’s Registry

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